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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs12657253 chr5:180702547 A/C 1.61E-6 477 15.9 16.5 8.37 KM Plot
THCA rs12666104 chr7:16460488 G/C 1.17E-10 482 15.07 17.7 18.82 KM Plot
THCA rs12671637 chr7:16408071 A/G 8.19E-9 470 15.07 17.73 17.77 KM Plot
THCA rs12710103 chr19:1013634 C/T 0.000234 490 16.6 14.9 12.7 KM Plot
THCA rs12713282 chr2:55081863 C/T 6.77E-6 490 17.1 14.92 16.73 KM Plot
THCA rs12713284 chr2:55228861 G/A 0.000198 481 13.97 15.97 17.93 KM Plot
THCA rs12725276 chr1:184082630 G/A 2.37E-6 479 15.68 17.47 25.93 KM Plot
THCA rs12727309 chr1:22461627 G/A 1.89E-9 477 15.68 17.83 9.47 KM Plot
THCA rs12729638 chr1:184120650 A/G 1.14E-14 480 15.23 17.73 15.15 KM Plot
THCA rs12729825 chr1:22382739 A/G 4.14E-8 489 15.3 17.68 9.47 KM Plot
THCA rs12729974 chr1:45995028 A/G 6.66E-5 486 10.4 16.18 16.97 KM Plot
THCA rs12734950 chr1:184032305 C/T 9.99E-16 479 14.97 17.7 25.93 KM Plot
THCA rs12737843 chr1:167010375 T/C 4.57E-7 484 15.17 17.23 17.17 KM Plot
THCA rs12740705 chr1:22421113 C/T 4.68E-8 489 15.32 17.73 9.47 KM Plot
THCA rs12744696 chr1:77551537 G/A 0.000114 484 15.9 15.73 17.07 KM Plot